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[J7] Functional connectomics spanning multiple areas of mouse visual cortex.
Nature, 640, pages 435–447, April 2025.
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[J6] Neuronal wiring diagram of an adult brain.
Nature, 634, pages 124–138, October 2024.
Sven Dorkenwald, Arie Matsliah, Amy R. Sterling, Philipp Schlegel, Szi-chieh Yu, Claire E. McKellar, Albert Lin, Marta Costa, Katharina Eichler, Yijie Yin, Will Silversmith, Casey Schneider-Mizell, Chris S. Jordan, Derrick Brittain, Akhilesh Halageri, Kai Kuehner, Oluwaseun Ogedengbe, Ryan Morey, Jay Gager, Krzysztof Kruk, Eric Perlman, Runzhe Yang, David Deutsch, Doug Bland, Marissa Sorek, Ran Lu, Thomas Macrina, Kisuk Lee, J. Alexander Bae, Shang Mu, Barak Nehoran, Eric Mitchell, Sergiy Popovych, Jingpeng Wu, Zhen Jia, Manuel A. Castro, Nico Kemnitz, Dodam Ih, Alexander Shakeel Bates, Nils Eckstein, Jan Funke, Forrest Collman, Davi D. Bock, Gregory S. X. E. Jefferis, H. Sebastian Seung*, Mala Murthy* & The FlyWire Consortium.
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[J5] Network statistics of the whole-brain connectome of Drosophila.
Nature, 634, pages 153–165, October 2024.
Albert Lin*, Runzhe Yang* (equal contribution), Sven Dorkenwald, Arie Matsliah, Amy R. Sterling, Philipp Schlegel, Szi-chieh Yu, Claire E. McKellar, Marta Costa, Katharina Eichler, Alexander Shakeel Bates, Nils Eckstein, Jan Funke, Gregory S. X. E. Jefferis & Mala Murthy.
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[J4] Whole-brain annotation and multi-connectome cell typing of Drosophila.
Nature, 634, pages 139–152, October 2024.
Philipp Schlegel, Yijie Yin, Alexander S. Bates, Sven Dorkenwald, Katharina Eichler, Paul Brooks, Daniel S. Han, Marina Gkantia, Marcia dos Santos, Eva J. Munnelly, Griffin Badalamente, Laia Serratosa Capdevila, Varun A. Sane, Alexandra M. C. Fragniere, Ladann Kiassat, Markus W. Pleijzier, Tomke Stürner, Imaan F. M. Tamimi, Christopher R. Dunne, Irene Salgarella, Alexandre Javier, Siqi Fang, Eric Perlman, Tom Kazimiers, Sridhar R. Jagannathan, Arie Matsliah, Amy R. Sterling, Szi-chieh Yu, Claire E. McKellar, FlyWire Consortium, Marta Costa, H. Sebastian Seung, Mala Murthy, Volker Hartenstein, Davi D. Bock* & Gregory S. X. E. Jefferis*.
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[J3] Predicting modular functions and neural coding of behavior from a synaptic wiring diagram.
Nature Neuroscience, 27, pages 2443–2454, November 2024.
Ashwin Vishwanathan, Alex Sood*, Jingpeng Wu*, Alexandro D. Ramirez*, Runzhe Yang, Nico Kemnitz, Dodam Ih, Nicholas Turner, Kisuk Lee, Ignacio Tartavull, William M. Silversmith, Chris S. Jordan, Celia David, Doug Bland, Amy Sterling, H. Sebastian Seung, Mark S. Goldman, Emre R. F. Aksay & the EyeWirers.
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[M11] LLMs are superior feedback providers: bootstrapping reasoning for lie detection with self-generated feedback.
Tanushree Banerjee, Richard Zhu, Runzhe Yang & Karthik Narasimhan. August 2024.
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[C9] COLLIE: Systematic construction of constrained text generation tasks.
Shunyu Yao*, Howard Chen*, Austin W. Hanjie*, Runzhe Yang* (equal contribution) & Karthik Narasimhan.
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[J2] Cyclic structure with cellular precision in a vertebrate sensorimotor neural circuit.
Current Biology, Volume 33, Issue 11, June 2023.
Runzhe Yang, Ashwin Vishwanathan, Jingpeng Wu, Nico Kemnitz, Dodam Ih, Nicholas Turner, Kisuk Lee, Ignacio Tartavull, William M. Silversmith, Chris S. Jordan, Celia David, Doug Bland, Amy Sterling, Mark S. Goldman, Emre R. F. Aksay, H. Sebastian Seung & the Eyewirers.
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[A3] Neuronal circuits for robust online fixed-point detection.
Runzhe Yang, David Lipshutz, Tiberiu Tesileanu, Johannes Friedrich & Dmitri Chklovskii.
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[C8] DataMUX: Data multiplexing for neural networks.
NeurIPS 2022 (Bell Labs Prize), New Orleans, USA, November 2022.
Vishvak Murahari, Carlos Jimenez, Runzhe Yang & Karthik Narasimhan.
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[J1] Reconstruction of neocortex: Organelles, compartments, cells, circuits, and activity.
Cell, Volume 185, Issue 6, March 2022.
Nicholas Turner*, Thomas Macrina*, Alexander Bae*, Runzhe Yang*, Alyssa Wilson*, Casey Schneider-Mizell*, Kisuk Lee*, Ran Lu*, Jingpeng Wu*, Agnes Bodor*, Adam Bleckert*, Derrick Brittain*, Emmanouil Froudarakis*, Sven Dorkenwald*, Forrest Collman*, Nico Kemnitz* (equal contribution), …, Sebastian Seung.
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[C7] Improving dialog systems for negotiation with personality modeling.
Runzhe Yang*, Jingxiao Chen* (equal contribution) & Karthik Narasimhan.
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[A2] Unsupervised feature discovery by neural networks with disynaptic recurrent inhibition.
Runzhe Yang, Kyle Luther & H. Sebastian Seung.
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[C6] A generalized algorithm for multi-objective reinforcement learning and policy adaptation.
Runzhe Yang, Xingyuan Sun & Karthik Narasimhan.
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[C5] Unsupervised learning by a "softened" correlation game: duality and convergence.
Kyle Luther*, Runzhe Yang* (equal contribution) & Sebastian Seung (invited paper).
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[C4] Imitation refinement for x-ray diffraction signal processing.
Junwen Bai, Zihang Lai, Runzhe Yang, Yexiang Xue, John Gregoire & Carla Gomes.
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[A1] Mitochondrial size gradients in cortical neurons suggested by 3D electron microscopy.
SfN 2018, San Diego, CA, USA, November 2018.
Nicholas L. Turner, Runzhe Yang, Agata Foryciarz, Kisuk Lee, William Silversmith, William Wong, Jingpeng Wu, Sven Dorkenwald, T. L. Lewis, Yusuke Hirabayashi, Franck Polleux, Nuno da Costa, R. Clay Reid & H. Sebastian Seung.
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[M3] Imitation refinement.
Runzhe Yang*, Junwen Bai* (equal contribution), Yexiang Xue, John Gregoire & Carla Gomes. May 2018.
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[M1] Pedagogical value-aligned crowdsourcing.
Runzhe Yang, Yexiang Xue & Carla Gomes. December 2017.
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[C3] Affordable on-line dialogue policy learning.
Runzhe Yang*, Cheng Chang* (equal authorship), Lu Chen, Xiang Zhou & Kai Yu.
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[C2] Agent-aware dropout DQN for safe and efficient on-line dialogue policy learning.
Lu Chen, Xiang Zhou, Cheng Chang, Runzhe Yang & Kai Yu.
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[C1] On-line dialogue policy learning with companion teaching.
Lu Chen, Runzhe Yang, Cheng Chang, Zihao Ye, Xiang Zhou & Kai Yu.